List of restriction enzyme cutting sites: Bst–Bv
This article contains a list of the most studied restriction enzymes whose names start with Bst to Bv inclusive. It contains approximately 200 enzymes.
The following information is given:
Enzyme : Accepted name of the molecule , according to the internationally adopted nomenclature [ 1] [ 2] , and bibliographical references . (Further reading: see the section "Nomenclature " in the article "Restriction enzyme ".)
PDB code : Code used to identify the structure of a protein in the PDB database of protein structures. The 3D atomic structure of a protein provides highly valuable information to understand the intimate details of its mechanism of action[ 3] [ 4] .
Source : Organism that naturally produces the enzyme.
Recognition sequence : Sequence of DNA recognized by the enzyme and to which it specifically binds.
Cut : Cutting site and DNA products of the cut. The recognition sequence and the cutting site usually match, but sometimes the cutting site can be dozens of nucleotides away from the recognition site[ 5] [ 6] .
Isoschizomers and neoschizomers : An isoschizomer is an enzyme that recognizes the same sequence as another. A neoschizomer is a special type of isoschizomer that recognizes the same sequence as another, but cuts in a different manner. A maximum number of 8-10 most common isoschizomers are indicated for every enzyme but there may be many more. Neoschizomers are shown in bold and green color font (e.g.: BamHI ). When "None on date " is indicated, that means that there were no registered isoschizomers in the databases on that date with a clearly defined cutting site. Isoschizomers indicated in white font and grey background correspond to enzymes not listed in the current lists:
as in this not listed enzyme:
EcoR70I
Whole list navigation
Restriction enzymes
Bst
Enzyme
PDB code
Source
Recognition sequence
Cut
Isoschizomers
BstI
Bacillus stearothermophilus 1503-4R
5' GGATCC
3' CCTAGG
5' ---G GATCC--- 3'
3' ---CCTAG G--- 5'
AccEBI, AliI, ApaCI, AsiI, BamHI , BnaI, BspAAIII, Nsp29132II
Bst1I
Bacillus stearothermophilus 1
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AglI, BseBI, Bse17I, BstNI, CbrI, CthII, EcoRII , MvaI, SspAI , TaqXI
Bst2I
Bacillus stearothermophilus 2
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AglI, BseBI, Bse17I, BstNI, BstOI, Bst2UI, CthII, EcoRII , MvaI
Bst6I
Bacillus stearothermophilus 6
5' CTCTTC
3' GAGAAG
5' ---CTCTTCN NNN--- 3'
3' ---GAGAAGNNNN --- 5'
Bst11I
Bacillus stearothermophilus 11
5' ACTGG
3' TGACC
5' ---ACTGGN --- 3'
3' ---TGAC CN--- 5'
Bst12I
Bacillus stearothermophilus 12
5' GCAGC
3' CGTCG
5' ---GCAGCN7 N NNNN--- 3'
3' ---CGTCGN7 NNNNN --- 5'
AlwXI, BbvI, BseKI, BseXI, Bsp423I, Bst71I, BstV1I
Bst19I
Bacillus stearothermophilus 19
5' GCATC
3' CGTAG
5' ---GCATCNNNN NN--- 3'
3' ---CGTAGNNNNNN --- 5'
Bst19II
Bacillus stearothermophilus 19
5' GATC
3' CTAG
5' --- GATC--- 3'
3' ---CTAG --- 5'
BfuCI, Bsp2095I, BspKT6I , CcyI, FnuCI, MboI, NmeCI, SsiAI
Bst28I
Bacillus stearothermophilus 28
5' ATCGAT
3' TAGCTA
5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5'
BciBI, BdiI, Bli41I, Bsa29I, Bsp106I, BspDI, LplI, SpmI, ZhoI
Bst38I
Bacillus stearothermophilus 38
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AorI, BseBI, Bse17I, BsiLI, BspNI, BstOI, Bst2UI, EcoRII , MvaI
Bst40I
Bacillus stearothermophilus 40
5' CCGG
3' GGCC
5' ---C CGG--- 3'
3' ---GGC C--- 5'
Bst71I
Bacillus stearothermophilus 71
5' GCAGC
3' CGTCG
5' ---GCAGCN7 N NNNN--- 3'
3' ---CGTCGN7 NNNNN --- 5'
AlwXI, BbvI, BseKI, BseXI, Bsp423I, Bst12I, BstV1I
Bst98I
Bacillus stearothermophilus C98
5' CTTAAG
3' GAATTC
5' ---C TTAAG--- 3'
3' ---GAATT C--- 5'
Bst100I
Bacillus stearothermophilus 100
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AorI, BseBI, Bse24I, BstNI, BstOI, Bst2UI, BthDI, EcoRII , MvaI, SleI
Bst1107I
Bacillus stearothermophilus RFL1107
5' GTATAC
3' CATATG
5' ---GTA TAC--- 3'
3' ---CAT ATG--- 5'
BstACI
Bacillus stearothermophilus AC
5' GRCGYC
3' CYGCRG
5' ---GR CGYC--- 3'
3' ---CYGC RG--- 5'
AcyI, AhaII, AosII, AstWI, AsuIII, BsaHI, HgiI, HgiDI, Hsp92I
BstAPI
Bacillus stearothermophilus AP
5' GCAN4 NTGC
3' CGTN4 NACG
5' ---GCANNNN NTGC--- 3'
3' ---CGTN NNNNACG--- 5'
ApaBI
BstAUI
Bacillus stearothermophilus AU
5' TGTACA
3' ACATGT
5' ---T GTACA--- 3'
3' ---ACATG T--- 5'
AauI,
BsmRI,
Bsp1407I, BsrGI,
Ssp4800I, SspBI
BstBI
Bacillus stearothermophilus B225
5' TTCGAA
3' AAGCTT
5' ---TT CGAA--- 3'
3' ---AAGC TT--- 5'
AcpI, Bim19I, Bpu14I, BspT104I, Csp45I, LspI, NspV, SspRFI
Bst2BI
Bacillus stearothermophilus 2B
5' CACGAG
3' GTGCTC
5' ---C ACGAG--- 3'
3' ---GTGCT C--- 5'
BstBAI
Bacillus stearothermophilus BA
5' YACGTR
3' RTGCAY
5' ---YAC GTR--- 3'
3' ---RTG CAY--- 5'
BstBSI
Bacillus stearothermophilus BS
5' GTATAC
3' CATATG
5' ---GTA TAC--- 3'
3' ---CAT ATG--- 5'
BstB7SI
Bacillus stearothermophilus B7S
5' RCCGGY
3' YGGCCR
5' ---R CCGGY--- 3'
3' ---YGGCC R--- 5'
BstBS32I
Bacillus stearothermophilus BS32
5' GAAGAC
3' CTTCTG
5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'
BstBZ153I
Bacillus stearothermophilus BZ153
5' GCGCGC
3' CGCGCG
5' ---G CGCGC--- 3'
3' ---CGCGC G--- 5'
Bst4CI
Bacillus stearothermophilus 4C
5' ACNGT
3' TGNCA
5' ---ACN GT--- 3'
3' ---TG NCA--- 5'
BstC8I
Bacillus stearothermophilus C8
5' GCNNGC
3' CGNNCG
5' ---GCN NGC--- 3'
3' ---CGN NCG--- 5'
BstD102I
Bacillus stearothermophilus D102
5' CCGCTC
3' GGCGAG
5' ---CCG CTC--- 3'
3' ---GGC GAG--- 5'
AccBSI, BsrBI, Bst31NI, MbiI
BstDEI
Bacillus stearothermophilus DE
5' CTNAG
3' GANTC
5' ---C TNAG--- 3'
3' ---GANT C--- 5'
BstDSI
Bacillus stearothermophilus DS
5' CCRYGG
3' GGYRCC
5' ---C CRYGG--- 3'
3' ---GGYRC C--- 5'
BstEII
Bacillus stearothermophilus ET
5' GGTNACC
3' CCANTGG
5' ---G GTNACC--- 3'
3' ---CCANTG G--- 5'
AcrII, BstPI, BstT9I, BstT10I, EcaI, Eco91I, EcoO65I, NspSAII, PspEI
BstENI
Bacillus stearothermophilus EN
5' CCTN4 NAGG
3' GGAN4 NTCC
5' ---CCTNN NNNAGG--- 3'
3' ---GGANNN NNTCC--- 5'
BstENII
Bacillus stearothermophilus EN
5' GATC
3' CTAG
5' --- GATC--- 3'
3' ---CTAG --- 5'
BfuCI, Bsp2095I, BspKT6I , CcyI, FnuCI, MboI, NmeCI, SsiAI
BstEZ359I
Bacillus stearothermophilus EZ359
5' GTTAAC
3' CAATTG
5' ---GTT AAC--- 3'
3' ---CAA TTG--- 5'
BstFI
Bacillus stearothermophilus FH58
5' AAGCTT
3' TTCGAA
5' ---A AGCTT--- 3'
3' ---TTCGA A--- 5'
BstF5I
Bacillus stearothermophilus F5
5' GGATG
3' CCTAC
5' ---GGATGNN --- 3'
3' ---CCTAC NN--- 5'
BstFNI
Bacillus stearothermophilus
5' CGCG
3' GCGC
5' ---CG CG--- 3'
3' ---GC GC--- 5'
AccII, BceBI, BepI, Bpu95I, BstUI, Csp68KVI, FauBII, MvnI, SelI
BstFZ438I
Bacillus stearothermophilus FZ438
5' CCCGC
3' GGGCG
5' ---CCCGCNNNN NN--- 3'
3' ---GGGCGNNNNNN --- 5'
BstGZ53I
Bacillus stearothermophilus GZ53
5' CGTCTC
3' GCAGAG
5' ---CGTCTCN NNNN--- 3'
3' ---GCAGAGNNNNN --- 5'
BstH2I
Bacillus stearothermophilus H2
5' RGCGCY
3' YCGCGR
5' ---RGCGC Y--- 3'
3' ---Y CGCGR--- 5'
AccB2I,
BfoI,
Bme142I ,
Bsp143II, HaeII, LpnI
BstH9I
Bacillus stearothermophilus H9
5' GGATC
3' CCTAG
5' ---GGATCNNNN N--- 3'
3' ---CCTAGNNNNN --- 5'
AclWI, AlwI, BinI,
BpuFI,
BspPI,
Bst31TI, BthII, Bth617I,
EacI
BstHHI
Bacillus stearothermophilus HH
5' GCGC
3' CGCG
5' ---GCG C--- 3'
3' ---C GCG--- 5'
AspLEI, BspLAI, CfoI, FnuDIII, HhaI, Hin6I , HinP1I , HsoI , HspAI , SciNI
BstHPI
Bacillus stearothermophilus HP
5' GTTAAC
3' CAATTG
5' ---GTT AAC--- 3'
3' ---CAA TTG--- 5'
BstHZ55I
Bacillus stearothermophilus HZ55
5' CCAN6 TGG
3' GGTN6 ACC
5' ---CCANNNNN NTGG--- 3'
3' ---GGTN NNNNNACC--- 5'
BstIZ316I
Bacillus stearothermophilus IZ316
5' CACNNNGTG
3' GTGNNNCAC
5' ---CACNNN GTG--- 3'
3' ---GTG NNNCAC--- 5'
AdeI, DraIII
BstJZ301I
Bacillus stearothermophilus JZ301
5' CTNAG
3' GANTC
5' ---C TNAG--- 3'
3' ---GANT C--- 5'
BstKTI
Bacillus stearothermophilus KT
5' GATC
3' CTAG
5' ---GAT C--- 3'
3' ---C TAG--- 5'
AspMDI , Bsp2095I , Bst19II , BspKT6I, DpnII , MboI , NmeCI , SsiAI
BstM6I
Bacillus stearothermophilus M6
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AorI, BseBI, Bse24I, BstNI, BstOI, Bst2UI, BthDI, Fsp1604I, MvaI
BstMAI
Bacillus stearothermophilus MA
5' GTCTC
3' CAGAG
5' ---GTCTCN NNNNN--- 3'
3' ---CAGAGNNNNN N--- 5'
Alw26I,
BcoDI, BscQII,
BsmAI,
BsoMAI
BstMBI
Bacillus stearothermophilus MB
5' GATC
3' CTAG
5' --- GATC--- 3'
3' ---CTAG --- 5'
Bce243I, Bsp105I, BspFI, BstKTI , CpfI, HacI, NdeII, Sth368I
BstMCI
Bacillus stearothermophilus MC
5' CGRYCG
3' GCYRGC
5' ---CGRY CG--- 3'
3' ---GC YRGC--- 5'
BstMWI
Bacillus stearothermophilus MW
5' GCN7 GC
3' CGN7 CG
5' ---GCNNNNN NNGC--- 3'
3' ---CGNN NNNNNCG--- 5'
BstMZ611I
Bacillus stearothermophilus MZ611
5' CCNGG
3' GGNCC
5' --- CCNGG--- 3'
3' ---GGNCC --- 5'
BstNI
Bacillus stearothermophilus
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AjnI , BciBII, BptI, Bst1I, BstOI, Bst2UI, Fsp1604I, SniI, Sth117I
Bst31NI
Bacillus stearothermophilus 31N
5' CCGCTC
3' GGCGAG
5' ---CCG CTC--- 3'
3' ---GGC GAG--- 5'
AccBSI, BsrBI, BstD102I, MbiI
BstNSI
Bacillus stearothermophilus 1161NS
5' RCATGY
3' YGTACR
5' ---RCATG Y--- 3'
3' ---Y GTACR--- 5'
BstNZ169I
Bacillus stearothermophilus NZ169
5' ATCGAT
3' TAGCTA
5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5'
BanIII, BciBI, BdiI, Bli41I, Bsa29I, BspDI, LplI, Rme21I, SpmI, ZhoI
BstOI
Bacillus stearothermophilus O22
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AjnI , ApyI, BciBII, BptI, Bst1I, Bst2UI, Fsp1604I, SniI, Sth117I
BstOZ616I
Bacillus stearothermophilus OZ616
5' GGGAC
3' CCCTG
5' ---GGGACN8 NN NNNN--- 3'
3' ---CCCTGN8 NNNNNN --- 5'
BstPI
Bacillus stearothermophilus
5' GGTNACC
3' CCANTGG
5' ---G GTNACC--- 3'
3' ---CCANTG G--- 5'
AcrII, AspAI, BstEII, BstT9I, EcaI, Eco91I, EcoO65I, NspSAII, PspEI
BstPAI
Bacillus stearothermophilus PA
5' GACN4 GTC
3' CTGN4 CAG
5' ---GACNN NNGTC--- 3'
3' ---CTGNN NNCAG--- 5'
BstPZ418I
5' GGATG
3' CCTAC
5' ---GGATGN8 N NNNN--- 3'
3' ---CCTACN8 NNNNN --- 5'
BstPZ740I
Bacillus stearothermophilus PZ740
5' CTTAAG
3' GAATTC
5' ---C TTAAG--- 3'
3' ---GAATT C--- 5'
BstRZ246I
Bacillus stearothermophilus RZ246
5' ATTTAAAT
3' TAAATTTA
5' ---ATTT AAAT--- 3'
3' ---TAAA TTTA--- 5'
BstSI
Bacillus stearothermophilus S183
5' CYCGRG
3' GRGCYC
5' ---C YCGRG--- 3'
3' ---GRGCY C--- 5'
Ama87I, AvaI, Bse15I, BsoBI, Eco27kI, NspIII, OfoI, PunAI
BstSCI
Bacillus stearothermophilus SC
5' CCNGG
3' GGNCC
5' --- CCNGG--- 3'
3' ---GGNCC --- 5'
BstSFI
Bacillus stearothermophilus SF
5' CTRYAG
3' GAYRTC
5' ---C TRYAG--- 3'
3' ---GAYRT C--- 5'
BstSNI
Bacillus stearothermophilus SN
5' TACGTA
3' ATGCAT
5' ---TAC GTA--- 3'
3' ---ATG CAT--- 5'
BstSWI
Bacillus stearothermophilus SW
5' ATTTAAAT
3' TAAATTTA
5' ---ATTT AAAT--- 3'
3' ---TAAA TTTA--- 5'
BstT7I
Bacillus stearothermophilus T7
5' TGATCA
3' ACTAGT
5' ---T GATCA--- 3'
3' ---ACTAG T--- 5'
AbaI, BclI, BsiQI,
BspXII, FbaI, Ksp22I,
ParI
BstT9I
Bacillus stearothermophilus T9
5' GGTNACC
3' CCANTGG
5' ---G GTNACC--- 3'
3' ---CCANTG G--- 5'
AspAI, Bse64I, BstT10I, BstPI, Eco91I, EcoO128I, NspSAII, PspEI
BstT10I
Bacillus stearothermophilus T10
5' GGTNACC
3' CCANTGG
5' ---G GTNACC--- 3'
3' ---CCANTG G--- 5'
AspAI, BseT10I, BstEII, BstT10I, Eco91I, EcoO128I, NspSAII, PspEI
Bst31TI
Bacillus stearothermophilus 31T
5' GGATC
3' CCTAG
5' ---GGATCNNNN N--- 3'
3' ---CCTAGNNNNN --- 5'
BstTS5I
Bacillus stearothermophilus TS5
5' GAAGAC
3' CTTCTG
5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'
BstUI
Bacillus stearothermophilus U458
5' CGCG
3' GCGC
5' ---CG CG--- 3'
3' ---GC GC--- 5'
AccII, BceBI, BepI, Bpu95I, BtkI, Csp68KVI, FauBII, MvnI, SelI
Bst2UI
Bacillus stearothermophilus 2U
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AjnI , BciBII, BptI, Bst1I, BstOI, BstM6I, SniI, SslI, TaqXI, ZanI
BstVI
Bacillus stearothermophilus V
5' CTCGAG
3' GAGCTC
5' ---C TCGAG--- 3'
3' ---GAGCT C--- 5'
BluI, BssHI, MlaAI, PanI, SauLPII, SciI , SlaI, StrI, XhoI
BstV1I
Bacillus stearothermophilus V1
5' GCAGC
3' CGTCG
5' ---GCAGCN7 N NNNN--- 3'
3' ---CGTCGN7 NNNNN --- 5'
AlwXI, BbvI, BseKI, BseXI, Bsp423I, Bst12I, Bst71I
BstV2I
Bacillus stearothermophilus V2
5' GAAGAC
3' CTTCTG
5' ---GAAGACNN NNNN--- 3'
3' ---CTTCTGNNNNNN --- 5'
BstXI
Bacillus stearothermophilus X1
5' CCAN6 TGG
3' GGTN6 ACC
5' ---CCANNNNN NTGG--- 3'
3' ---GGTN NNNNNACC--- 5'
BstX2I
Bacillus stearothermophilus X2
5' RGATCY
3' YCTAGR
5' ---R GATCY--- 3'
3' ---YCTAG R--- 5'
BstYI
1SDO
Bacillus stearothermophilus Y406
5' RGATCY
3' YCTAGR
5' ---R GATCY--- 3'
3' ---YCTAG R--- 5'
BstZI
Bacillus stearothermophilus Z130
5' CGGCCG
3' GCCGGC
5' ---C GGCCG--- 3'
3' ---GCCGG C--- 5'
AaaI, BseX3I, EagI, EclXI, Eco52I, SenPT16I, XmaIII
BstZ17I
Bacillus stearothermophilus 38M
5' GTATAC
3' CATATG
5' ---GTA TAC--- 3'
3' ---CAT ATG--- 5'
Bsu - Bv
Enzyme
PDB code
Source
Recognition sequence
Cut
Isoschizomers
Bsu6I
Bacillus subtilis 6v1
5' CTCTTC
3' GAGAAG
5' ---CTCTTCN NNN--- 3'
3' ---GAGAAGNNNN --- 5'
Bsu15I
Bacillus subtilis 15
5' ATCGAT
3' TAGCTA
5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5'
AagI, BanIII, BavCI, Bsa29I, BseCI, BspDI, BsuTUI, ClaI
Bsu23I
Bacillus subtilis 23
5' TCCGGA
3' AGGCCT
5' ---T CCGGA--- 3'
3' ---AGGCC T--- 5'
AccIII, BbvAIII, BseAI, BsiMI, BspEI, BspMII, CauB3I, MroI
Bsu36I
Bacillus subtilis 36
5' CCTNAGG
3' GGANTCC
5' ---CC TNAGG--- 3'
3' ---GGANT CC--- 5'
AxyI, BliHKI, BspR7I, Bsu36I, Eco81I, MstII, OxaNI, SshAI
Bsu54I
Bacillus subtilis 54
5' GGNCC
3' CCNGG
5' ---G GNCC--- 3'
3' ---CCNG G--- 5'
AsuI, Bac36I, BavBII, BsiZI, BspBII, CcuI, MaeK81II, PspPI
Bsu1532I
Bacillus subtilis 1532
5' CGCG
3' GCGC
5' ---CG CG--- 3'
3' ---GC GC--- 5'
BceBI, Bpu95I, Bsp123I, BstUI, BtkI, Csp68KVI, FnuDII, MvnI, ThaI
Bsu1854I
Bacillus subtilis 1854
5' GRGCYC
3' CYCGRG
5' ---GRGCY C--- 3'
3' ---C YCGRG--- 5'
BsuBI
Bacillus subtilis
5' CTGCAG
3' GACGTC
5' ---CTGCA G--- 3'
3' ---G ACGTC--- 5'
AjoI, BloHII, CflI, CstI, Ecl37kI, HalII, Psp23I, PstI, SalPI, SflI, YenI
BsuFI
Bacillus subtilis
5' CCGG
3' GGCC
5' ---C CGG--- 3'
3' ---GGC C--- 5'
BsuMI
Bacillus subtilis 168
5' CTCGAG
3' GAGCTC
5' ---C TCGAG--- 3'
3' ---GAGCT C--- 5'
XhoI, BssHI, TliI, PaeR7I, Sfr274I, SlaI, StrI
BsuRI
Bacillus subtilis R
5' GGCC
3' CCGG
5' ---GG CC--- 3'
3' ---CC GG--- 5'
HaeIII
BsuTUI
Bacillus subtilis TU
5' ATCGAT
3' TAGCTA
5' ---AT CGAT--- 3'
3' ---TAGC TA--- 5'
AagI, BanIII, BavCI, Bsa29I, BseCI, BspDI, Bsu15I, ClaI
BteI
Brochothrix thermosphacter
5' GGCC
3' CCGG
5' ---GG CC--- 3'
3' ---CC GG--- 5'
BtgI
Bacillus thermoglucosidasius
5' CCRYGG
3' GGYRCC
5' ---C CRYGG--- 3'
3' ---GGYRC C--- 5'
BtgZI
Bacillus thermoglucosidasius
5' GCGATG
3' CGCTAC
5' ---GCGATGN8 NN NNNN--- 3'
3' ---CGCTACN8 NNNNNN --- 5'
BthAI
Bacillus thuringiensis AII
5' GGWCC
3' CCWGG
5' ---G GWCC--- 3'
3' ---CCWG G--- 5'
BamNxI, BcuAI, BsrAI, Eco47I, FspMSI, HgiCII, HgiJI, SmuEI
BthCI
Bacillus thuringiensis 2294
5' GCNGC
3' CGNCG
5' ---GCNG C--- 3'
3' ---C GNCG--- 5'
BthDI
Bacillus thuringiensis D4
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AorI, ApyI, Bse24I, BstNI, BstOI, Bst2UI, CbrI, EcoRII , MvaI, SleI
BthEI
Bacillus thuringiensis E
5' CCWGG
3' GGWCC
5' ---CC WGG--- 3'
3' ---GGW CC--- 5'
AorI, BseBI, Bse24I, BstNI, BstOI, Bst2UI, BthDI, EcoRII , MvaI, SleI
BtkI
Bacillus thuringiensis Kumantoensis
5' CGCG
3' GCGC
5' ---CG CG--- 3'
3' ---GC GC--- 5'
BepI, Bpu95I, Bsp123I, BstFNI, BstUI, BtkI, FalII, SelI , ThaI
BtkII
Bacillus thuringiensis Kumantoensis
5' GATC
3' CTAG
5' --- GATC--- 3'
3' ---CTAG --- 5'
BfuCI, Bsp67I, Bst19II, CcyI, FnuCI, MboI, NmeCI, SauMI
BtrI
Bacillus stearothermophilus SE-U62
5' CACGTC
3' GTGCAG
5' ---CAC GTC--- 3'
3' ---GTG CAG--- 5'
BtsI
Bacillus thermoglucosidasius
5' GCAGTG
3' CGTCAC
5' ---GCAGTGNN --- 3'
3' ---CGTCAC NN--- 5'
BveI
Brevundimonas vesicularis RFL1
5' ACCTGC
3' TGGACG
5' ---ACCTGCNNNN NNNN--- 3'
3' ---TGGACGNNNNNNNN --- 5'
Acc36I, BfuAI, BspMI
BvuI
Bacillus vulgatis
5' GRGCYC
3' CYCGRG
5' ---GRGCY C--- 3'
3' ---C YCGRG--- 5'
BvuBI
Bacteroides vulgatus
5' CGTACG
3' GCATGC
5' ---C GTACG--- 3'
3' ---GCATG C--- 5'
Notes
^ Smith HO, Nathans D (December 1973). "Letter: A suggested nomenclature for bacterial host modification and restriction systems and their enzymes". J. Mol. Biol . 81 (3): 419– 23. doi :10.1016/0022-2836(73)90152-6 . PMID 4588280 .
^ Roberts RJ, Belfort M, Bestor T, Bhagwat AS, Bickle TA, Bitinaite J, Blumenthal RM, Degtyarev SK, Dryden DT, Dybvig K, Firman K, Gromova ES, Gumport RI, Halford SE, Hattman S, Heitman J, Hornby DP, Janulaitis A, Jeltsch A, Josephsen J, Kiss A, Klaenhammer TR, Kobayashi I, Kong H, Krüger DH, Lacks S, Marinus MG, Miyahara M, Morgan RD, Murray NE, Nagaraja V, Piekarowicz A, Pingoud A, Raleigh E, Rao DN, Reich N, Repin VE, Selker EU, Shaw PC, Stein DC, Stoddard BL, Szybalski W, Trautner TA, Van Etten JL, Vitor JM, Wilson GG, Xu SY (April 2003). "A nomenclature for restriction enzymes, DNA methyltransferases, homing endonucleases and their genes" . Nucleic Acids Res . 31 (7): 1805– 12. doi :10.1093/nar/gkg274 . PMC 152790 . PMID 12654995 .
^ Jeremy MB, John LT, Lubert S (2002). "3. Protein Structure and Function" . Biochemistry . San Francisco: W. H. Freeman. ISBN 0-7167-4684-0 .
^ Anfinsen C.B. (1973). "Principles that Govern the Folding of Protein Chains". Science . 181 (4096): 223– 30. doi :10.1126/science.181.4096.223 . PMID 4124164 .
^ Kessler C, Manta V (August 1990). "Specificity of restriction endonucleases and DNA modification methyltransferases a review (Edition 3)". Gene . 92 (1– 2): 1– 248. doi :10.1016/0378-1119(90)90486-B . PMID 2172084 .
^ Pingoud A, Jeltsch A (September 2001). "Structure and function of type II restriction endonucleases" . Nucleic Acids Res . 29 (18): 3705– 27. doi :10.1093/nar/29.18.3705 . PMC 55916 . PMID 11557805 .
Basic Concept Recognition sequence 4bp Recognition sequence 5bp Recognition sequence 6bp Recognition sequence 8bp Lists